Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015834422.1_cds_XP_016505596.1_18918
CDS Infomation

[gene=LOC107823469] [db_xref=GeneID:107823469] [protein=pantothenate kinase 1-like] [protein_id=XP_016505596.1] [location=complement(join(44176..44434,44716..44828,45770..45901,47177..47270,47357..47451,48389..48508,49189..49305,51596..51642,52347..52556,53757..53862))] [gbkey=CDS]
Sequence

ATGGAGAGAAAGTTAATTGATGAGAAATTAGAGAATACTGATTCCAGTTCTGAGCTGATT
AAGCAATCTGCTGATGAAATTTCTCATTTGGCTATCGACATTGGAGGCTCCCTCATCAAA
ATTGTATACTTTTCAACCAACAGTAAGTGCAGCACTAATGATGAGGCACCAACATTACCA
AAAGAAAGACAGGAAGTTCCCAATGGAGACCTTAACCATCACATTCTTAGTGGCGGACTT
CATTTCGTGAAGTTCGAGACAAGCAAGATTGAGGACTGCATAAATTTTTTGTCTTCCAAG
AAACTTCAACAGTGCGGTGCTCAATGTCATCATTCTCATGCTGTTGACAAGATCAAGATT
AAGGCAACATGTGGTGGAGCTTTCAAGTTTGCCGATCTATTCAAAGAAAAACTTGGCATA
ACTCTGGACAAGGTAGAGGAAATGGAGTCTCTTGTTGCTGGAGCAAATTTTTTGCTTAAG
GCTGTCAACCATGAAGCTTATACATATATTGGAGGACGAAAGGAATACGTGCAGATTGAT
AAGAATGACTTATATCCTTACCTCCTTGTCAACATTGGGTCTGGGGTTAGCATGATAAAG
GTAGATGGAGATGAAAAATTTCAGAGAGTTAGTGGAACTAGCGTTGGTGGTGGCACTTTC
TGGGGCCTAGGAAAACTTTTGACTAAATGCAAAAGTTTTGATGAGTTGCTGGAATTGAGC
CATCAGGGAAACAACAGAGTGATAGACATGCTCGTTGGAGATATTTATGGGGGAATGGAC
TATGCTAAGATCGGCCTTGCATCAACAGCCATTGCCTCTAGCTTCGGTAAGCCGGTCTCA
GAAAACAGAGAGCTCGAAGACTACAAACCAGAAGACATCGCCCGGTCCCTTTTAAGAATG
ATCTCAAATAACATCGGACAGATTGCATACTTGAATGCTCTTCGTTTTGGGCTCAAGCGC
ATTATTTTGGGAGGTTTCTTCATCCGTGACCATGCTTATACAATGGACACAATTTCTGTT
GCAGTTGATTTCTGGTCGAAGGGTGAGGCAAAAGCAATGTTCTTGCGGCATGAGGGGTTT
CTTGGAGCTCTAGGAGCTTTCATGAATTATAAAGATGGAAATGCTGATTTGATGCCCCTT
CAGTTAGTTGAGCAAACTCCTAAGAGTTCAAGTTGCATAGTAGATAGGATTCATAACTCT
ACGCGCGTGCACGAAAATGAAAGTGGTGCCCTAGATTGTAGATTGCGAGTTAGTAGCTCA
TTTAAAATTTATGATGAGGTCAAAAGGTGTTGA

Peptide Sequence

PEP ID

XP_016505596.1
PEP Infomation

PREDICTED: pantothenate kinase 1-like [Nicotiana tabacum]
Sequence

MERKLIDEKLENTDSSSELIKQSADEISHLAIDIGGSLIKIVYFSTNSKCSTNDEAPTLP
KERQEVPNGDLNHHILSGGLHFVKFETSKIEDCINFLSSKKLQQCGAQCHHSHAVDKIKI
KATCGGAFKFADLFKEKLGITLDKVEEMESLVAGANFLLKAVNHEAYTYIGGRKEYVQID
KNDLYPYLLVNIGSGVSMIKVDGDEKFQRVSGTSVGGGTFWGLGKLLTKCKSFDELLELS
HQGNNRVIDMLVGDIYGGMDYAKIGLASTAIASSFGKPVSENRELEDYKPEDIARSLLRM
ISNNIGQIAYLNALRFGLKRIILGGFFIRDHAYTMDTISVAVDFWSKGEAKAMFLRHEGF
LGALGAFMNYKDGNADLMPLQLVEQTPKSSSCIVDRIHNSTRVHENESGALDCRLRVSSS
FKIYDEVKRC

Transcript Sequence

Gene sequence data has not been registered.